PyMOL(TM) 2.3.2 - Incentive Product
Copyright (C) Schrodinger, LLC
This Executable Build integrates and extends Open-Source PyMOL.
Detected OpenGL version 2.1. Shaders available.
Detected GLSL version 1.20.
OpenGL graphics engine:
GL_VENDOR: Intel Inc.
GL_RENDERER: Intel HD Graphics 3000 OpenGL Engine
GL_VERSION: 2.1 INTEL-10.4.14
License Expiry date: 01-mar-2020
License expired
Detected 4 CPU cores. Enabled multithreaded rendering.
CmdLoad: PDB-string loaded into object "T0958_QARESR_best_RaptorX-DeepModeller_TS3", state 1.
CmdLoad: PDB-string loaded into object "T0958_QARESR_loss_GaussDCA_TS3", state 1.
CmdLoad: PDB-string loaded into object "T0958_QDeep_best_BAKER-ROSETTASERVER_TS1", state 1.
CmdLoad: PDB-string loaded into object "T0958_QDeep_loss_PRAYOG_TS5", state 1.
CmdLoad: PDB-string loaded into object "T0958", state 1.
Match: read scoring matrix.
Match: assigning 77 x 96 pairwise scores.
MatchAlign: aligning residues (77 vs 96)...
MatchAlign: score 408.000
ExecutiveAlign: 77 atoms aligned.
ExecutiveRMS: 1 atoms rejected during cycle 1 (RMSD=3.77).
ExecutiveRMS: 1 atoms rejected during cycle 2 (RMSD=3.67).
ExecutiveRMS: 1 atoms rejected during cycle 3 (RMSD=3.59).
ExecutiveRMS: 1 atoms rejected during cycle 4 (RMSD=3.50).
ExecutiveRMS: 2 atoms rejected during cycle 5 (RMSD=3.42).
Executive: RMSD = 3.244 (71 to 71 atoms)
Executive: object "aln_T0958_to_T0958_QDeep_best_BAKER-ROSETTASERVER_TS1" created.
Match: read scoring matrix.
Match: assigning 77 x 96 pairwise scores.
MatchAlign: aligning residues (77 vs 96)...
MatchAlign: score 408.000
ExecutiveAlign: 77 atoms aligned.
Executive: RMSD = 2.628 (77 to 77 atoms)
Executive: object "aln_T0958_to_T0958_QARESR_best_RaptorX-DeepModeller_TS3" created.
Match: read scoring matrix.
Match: assigning 77 x 96 pairwise scores.
MatchAlign: aligning residues (77 vs 96)...
MatchAlign: score 408.000
ExecutiveAlign: 77 atoms aligned.
ExecutiveRMS: 1 atoms rejected during cycle 1 (RMSD=3.77).
ExecutiveRMS: 1 atoms rejected during cycle 2 (RMSD=3.67).
ExecutiveRMS: 1 atoms rejected during cycle 3 (RMSD=3.59).
ExecutiveRMS: 1 atoms rejected during cycle 4 (RMSD=3.50).
ExecutiveRMS: 2 atoms rejected during cycle 5 (RMSD=3.42).
Executive: RMSD = 3.244 (71 to 71 atoms)
Executive: object "aln_T0958_to_T0958_QDeep_best_BAKER-ROSETTASERVER_TS1" created.
Match: read scoring matrix.
Match: assigning 77 x 96 pairwise scores.
MatchAlign: aligning residues (77 vs 96)...
MatchAlign: score 408.000
ExecutiveAlign: 77 atoms aligned.
Executive: RMSD = 2.628 (77 to 77 atoms)
Executive: object "aln_T0958_to_T0958_QARESR_best_RaptorX-DeepModeller_TS3" created.
Match: read scoring matrix.
Match: assigning 96 x 77 pairwise scores.
MatchAlign: aligning residues (96 vs 77)...
MatchAlign: score 408.000
ExecutiveAlign: 77 atoms aligned.
ExecutiveRMS: 1 atoms rejected during cycle 1 (RMSD=3.77).
ExecutiveRMS: 1 atoms rejected during cycle 2 (RMSD=3.67).
ExecutiveRMS: 1 atoms rejected during cycle 3 (RMSD=3.59).
ExecutiveRMS: 1 atoms rejected during cycle 4 (RMSD=3.50).
ExecutiveRMS: 2 atoms rejected during cycle 5 (RMSD=3.42).
Executive: RMSD = 3.244 (71 to 71 atoms)
Executive: object "aln_T0958_QDeep_best_BAKER-ROSETTASERVER_TS1_to_T0958" created.
Executive: Colored 769 atoms and 1 object.
Executive: Colored 769 atoms and 1 object.
Executive: Colored 1275 atoms and 1 object.
PyMOL>png /Volumes/Untitled/T0958_best_all.png, 0, 0, -1, ray=0
ScenePNG: wrote 640x476 pixel image to file "/Volumes/Untitled/T0958_best_all.png".
PyMOL>png /Volumes/Untitled/T0958_best_all.png, 0, 0, -1, ray=0
ScenePNG: wrote 640x476 pixel image to file "/Volumes/Untitled/T0958_best_all.png".
Executive: Colored 769 atoms and 1 object.
PyMOL>png /Volumes/Untitled/T0958_QARESE_best_cmp.png, 0, 0, -1, ray=0
ScenePNG: wrote 640x476 pixel image to file "/Volumes/Untitled/T0958_QARESE_best_cmp.png".
PyMOL>png /Volumes/Untitled/T0958_QDeep_best_cmp.png, 0, 0, -1, ray=0
ScenePNG: wrote 640x476 pixel image to file "/Volumes/Untitled/T0958_QDeep_best_cmp.png".
Match: read scoring matrix.
Match: assigning 96 x 77 pairwise scores.
MatchAlign: aligning residues (96 vs 77)...
MatchAlign: score 408.000
ExecutiveAlign: 77 atoms aligned.
Executive: RMSD = 12.403 (77 to 77 atoms)
Executive: object "aln_T0958_QARESR_loss_GaussDCA_TS3_to_T0958" created.
PyMOL>png /Volumes/Untitled/T0958_QARESE_loss_cmp.png, 0, 0, -1, ray=0
ScenePNG: wrote 640x476 pixel image to file "/Volumes/Untitled/T0958_QARESE_loss_cmp.png".
Match: read scoring matrix.
Match: assigning 96 x 77 pairwise scores.
MatchAlign: aligning residues (96 vs 77)...
MatchAlign: score 408.000
ExecutiveAlign: 77 atoms aligned.
ExecutiveRMS: 1 atoms rejected during cycle 1 (RMSD=14.66).
ExecutiveRMS: 1 atoms rejected during cycle 2 (RMSD=14.36).
Executive: RMSD = 14.057 (75 to 75 atoms)
Executive: object "aln_T0958_QDeep_loss_PRAYOG_TS5_to_T0958" created.
PyMOL>png /Volumes/Untitled/T0958_QDeep_loss_cmp.png, 0, 0, -1, ray=0
ScenePNG: wrote 640x476 pixel image to file "/Volumes/Untitled/T0958_QDeep_loss_cmp.png".
Setting: bg_rgb set to white.
PyMOL>png /Volumes/Untitled/T0958_QDeep_loss_cmp.png, 0, 0, -1, ray=0
ScenePNG: wrote 640x476 pixel image to file "/Volumes/Untitled/T0958_QDeep_loss_cmp.png".
Executive: Colored 769 atoms and 1 object.
PyMOL>png /Volumes/Untitled/T0958_QDeep_loss_cmp.png, 0, 0, -1, ray=0
ScenePNG: wrote 640x476 pixel image to file "/Volumes/Untitled/T0958_QDeep_loss_cmp.png".
Executive: Colored 769 atoms and 1 object.
PyMOL>png /Volumes/Untitled/T0958_QARESE_loss_cmp.png, 0, 0, -1, ray=0
ScenePNG: wrote 640x476 pixel image to file "/Volumes/Untitled/T0958_QARESE_loss_cmp.png".
PyMOL>png /Volumes/Untitled/T0958_QARESE_best_cmp.png, 0, 0, -1, ray=0
ScenePNG: wrote 640x476 pixel image to file "/Volumes/Untitled/T0958_QARESE_best_cmp.png".
PyMOL>png /Volumes/Untitled/T0958_QDeep_best_cmp.png, 0, 0, -1, ray=0
ScenePNG: wrote 640x476 pixel image to file "/Volumes/Untitled/T0958_QDeep_best_cmp.png".
Executive: Colored 769 atoms and 1 object.
PyMOL>png /Volumes/Untitled/T0958_best_all.png, 0, 0, -1, ray=0
ScenePNG: wrote 640x476 pixel image to file "/Volumes/Untitled/T0958_best_all.png".
