All DNA is composed of a series of nucleotides abbreviated as A, C, G, and T, for example: "ACGAATTCCG". When studying DNA, it is sometimes useful to identify repeated sequences within the DNA.

Write a function to find all the 10-letter-long sequences (substrings) that occur more than once in a DNA molecule.

For example,

Given s = "AAAAACCCCCAAAAACCCCCCAAAAAGGGTTT",

Return:
["AAAAACCCCC", "CCCCCAAAAA"].

其实就是一个字符串,然后以10个为单位,求重复两次以上的字符串。

 

1、用一个set就可以实现了。

public class Solution {
    public List<String> findRepeatedDnaSequences(String s) {
        List<String> list = new ArrayList();
        int len = s.length();
        if (len <= 10){
            return list;
        }
        HashSet<String> set = new HashSet();
        for (int i = 10; i <= len; i++){
            String str = s.substring(i - 10, i);
            if (set.contains(str) && !list.contains(str)){
                list.add(str);
            } else {
                set.add(str);
            }
        }
        return list;
    }
}

 

 

2、discuss里面是有一些利用位操作的,例如。

public List<String> findRepeatedDnaSequences(String s) {
    Set<Integer> words = new HashSet<>();
    Set<Integer> doubleWords = new HashSet<>();
    List<String> rv = new ArrayList<>();
    char[] map = new char[26];
    //map['A' - 'A'] = 0;
    map['C' - 'A'] = 1;
    map['G' - 'A'] = 2;
    map['T' - 'A'] = 3;

    for(int i = 0; i < s.length() - 9; i++) {
        int v = 0;
        for(int j = i; j < i + 10; j++) {
            v <<= 2;
            v |= map[s.charAt(j) - 'A'];
        }
        if(!words.add(v) && doubleWords.add(v)) {
            rv.add(s.substring(i, i + 10));
        }
    }
    return rv;
}