wangchuang2017

15675871637 WeChat wangchuang2022 QQ 2545804152 wangchuang2017@hunnu.edu.cn

09 2020 档案

Hybrid assembly of the large and highly repetitive genome of Aegilops tauschii, a progenitor of bread wheat, with the MaSuRCA mega-reads algorithm
摘要:Hybrid assembly of the large and highly repetitive genome of Aegilops tauschii, a progenitor of bread wheat, with the MaSuRCA mega-reads algorithm 用马瑟 阅读全文

posted @ 2020-09-30 21:45 王闯wangchuang2017 阅读(147) 评论(0) 推荐(0) 编辑

Evaluation of hybrid and non-hybrid methods for de novo assembly of nanopore reads
摘要:Evaluation of hybrid and non-hybrid methods for de novo assembly of nanopore reads 纳米孔从头组装的杂化和非杂化方法的评价 Ivan Sović, Krešimir Križanović, Karolj Skala,  阅读全文

posted @ 2020-09-30 21:43 王闯wangchuang2017 阅读(150) 评论(0) 推荐(0) 编辑

Efficient Hybrid De Novo Error Correction and Assembly for Long Reads
摘要:Efficient Hybrid De Novo Error Correction and Assembly for Long Reads Abstract: The new generation of long reads generated by Oxford nanopore sequenci 阅读全文

posted @ 2020-09-30 21:40 王闯wangchuang2017 阅读(110) 评论(0) 推荐(0) 编辑

Hybrid assembly of the large and highly repetitive genome of Aegilops tauschii, a progenitor of bread wheat, with the MaSuRCA mega-reads algorithm
摘要:Hybrid assembly of the large and highly repetitive genome of Aegilops tauschii, a progenitor of bread wheat, with the MaSuRCA mega-reads algorithm 用马瑟 阅读全文

posted @ 2020-09-30 21:37 王闯wangchuang2017 阅读(143) 评论(0) 推荐(0) 编辑

HISEA: HIerarchical SEed Aligner for PacBio data
摘要:HISEA: HIerarchical SEed Aligner for PacBio data Nilesh Khiste & Lucian Ilie BMC Bioinformatics volume 18, Article number: 564 (2017) Cite this articl 阅读全文

posted @ 2020-09-30 21:36 王闯wangchuang2017 阅读(124) 评论(0) 推荐(0) 编辑

Building two indica rice reference genomes with PacBio long-read and Illumina paired-end sequencing data
摘要:Building two indica rice reference genomes with PacBio long-read and Illumina paired-end sequencing data 利用PacBio long-read和Illumina配对端测序数据构建两个籼稻参考基因组 阅读全文

posted @ 2020-09-30 21:33 王闯wangchuang2017 阅读(180) 评论(0) 推荐(0) 编辑

Genome assembly using Nanopore-guided long and error-free DNA reads
摘要:Genome assembly using Nanopore-guided long and error-free DNA reads Mohammed-Amin Madoui, Stefan Engelen, Corinne Cruaud, Caroline Belser, Laurie Bert 阅读全文

posted @ 2020-09-30 21:30 王闯wangchuang2017 阅读(179) 评论(0) 推荐(0) 编辑

Hybrid assembly with long and short reads improves discovery of gene family expansions
摘要:Hybrid assembly with long and short reads improves discovery of gene family expansions 长链和短链杂交组合提高了基因家族扩展的发现 Jason R. Miller, Peng Zhou, Joann Mudge, 阅读全文

posted @ 2020-09-30 21:27 王闯wangchuang2017 阅读(237) 评论(0) 推荐(0) 编辑

Comparison of long-read sequencing technologies in the hybrid assembly of complex bacterial genomes
摘要:Comparison of long-read sequencing technologies in the hybrid assembly of complex bacterial genomesAbstractIllumina sequencing allows rapid, cheap and 阅读全文

posted @ 2020-09-30 21:25 王闯wangchuang2017 阅读(103) 评论(0) 推荐(0) 编辑

A Fast Approximate Algorithm for Mapping Long Reads to Large Reference Databases
摘要:A Fast Approximate Algorithm for Mapping Long Reads to Large Reference Databases 一种将长读取映射到大型引用数据库的快速近似算法 Authors Authors and affiliations Chirag Jain 阅读全文

posted @ 2020-09-30 21:23 王闯wangchuang2017 阅读(161) 评论(0) 推荐(0) 编辑

Inversion detection using PacBio long reads
摘要:Inversion detection using PacBio long readsStructural variations have received considerable attention in the past decade owing to their importance in 阅读全文

posted @ 2020-09-30 21:20 王闯wangchuang2017 阅读(92) 评论(0) 推荐(0) 编辑

Fast and accurate de novo genome assembly from long uncorrected reads
摘要:Fast and accurate de novo genome assembly from long uncorrected reads 快速和准确的从头基因组组装从长时间未纠正的read Robert Vaser1,5, Ivan Sović2,5, Niranjan Nagarajan3 an 阅读全文

posted @ 2020-09-30 21:15 王闯wangchuang2017 阅读(159) 评论(0) 推荐(0) 编辑

Nanopore sequencing and assembly of a human genome with ultra-long reads
摘要:Nanopore sequencing and assembly of a human genome with ultra-long reads Miten Jain, Sergey Koren, […] Matthew Loose Nature Biotechnology volume 36, p 阅读全文

posted @ 2020-09-30 21:08 王闯wangchuang2017 阅读(247) 评论(0) 推荐(0) 编辑

Genome Sequencing and Assembly by Long Reads in Plants
摘要:Genome Sequencing and Assembly by Long Reads in Plants 植物基因组的长read测序和组装 by 1 College of Agronomy, Shenyang Agricultural University, 120 Dongling Road, 阅读全文

posted @ 2020-09-30 21:06 王闯wangchuang2017 阅读(131) 评论(0) 推荐(0) 编辑

SiLiCO: A Simulator of Long Read Sequencing in PacBio and Oxford Nanopore
摘要:SiLiCO: A Simulator of Long Read Sequencing in PacBio and Oxford Nanopore 硅:在PacBio和牛津纳米孔长读测序的模拟器 View ORCID ProfileEthan Alexander García Baker, Sara 阅读全文

posted @ 2020-09-30 21:03 王闯wangchuang2017 阅读(170) 评论(0) 推荐(0) 编辑

The advantages and disadvantages of short- and long-read metagenomics to infer bacterial and eukaryotic community composition
摘要:短读宏基因组学和长读宏基因组学在推断细菌和真核生物群落组成方面的优缺点 Abstract Background The first step in understanding ecological community diversity and dynamics is quantifying com 阅读全文

posted @ 2020-09-30 20:57 王闯wangchuang2017 阅读(134) 评论(0) 推荐(0) 编辑

Non Hybrid Long Read Consensus Using Local De Bruijn Graph Assembly 非混合长读一致性使用局部德布鲁因图装配
摘要:Non Hybrid Long Read Consensus Using Local De Bruijn Graph Assembly 非混合长读一致性使用局部德布鲁因图装配 German Tischler, Eugene W. Myers doi: https://doi.org/10.1101/ 阅读全文

posted @ 2020-09-30 20:54 王闯wangchuang2017 阅读(160) 评论(0) 推荐(0) 编辑

PBSIM2: a simulator for long read sequencers with a novel generative model of quality scores
摘要:PBSIM2: a simulator for long read sequencers with a novel generative model of quality scores Yukiteru Ono, Kiyoshi Asai, Michiaki Hamada Bioinformatic 阅读全文

posted @ 2020-09-30 20:53 王闯wangchuang2017 阅读(304) 评论(0) 推荐(0) 编辑

The long and the short of it: unlocking nanopore long-read RNA sequencing data with short-read tools
摘要:The long and the short of it: unlocking nanopore long-read RNA sequencing data with short-read tools 长和短:用短读工具解锁纳米孔长读RNA测序数据 View ORCID ProfileXueyi D 阅读全文

posted @ 2020-09-30 20:50 王闯wangchuang2017 阅读(144) 评论(0) 推荐(0) 编辑

Improving the sensitivity of long read overlap detection using grouped short k-mer matches
摘要:Improving the sensitivity of long read overlap detection using grouped short k-mer matches Nan Du, Jiao Chen & Yanni Sun BMC Genomics volume 20, Artic 阅读全文

posted @ 2020-09-30 20:45 王闯wangchuang2017 阅读(130) 评论(0) 推荐(0) 编辑

大数据与精准医学
摘要:大数据与精准医学 来自《中国科研信息化蓝皮书2015》 作者: 陈扬勇[i] 出版日期:2016-03 ISBN:978-7-03-047716-3 中图法分类:G322 推荐机构购买 购买(2.68) 收藏 复制引文 分享 内容提要 在地球上繁衍了几十亿年的生物,从病毒、细菌到高等动、植物,千姿百 阅读全文

posted @ 2020-09-30 20:44 王闯wangchuang2017 阅读(243) 评论(0) 推荐(0) 编辑

Long-read sequencing data analysis for yeasts
摘要:Long-read sequencing data analysis for yeasts 酵母长read测序数据分析 Jia-Xing Yue & Gianni Liti Nature Protocols volume 13, pages1213–1231(2018)Cite this artic 阅读全文

posted @ 2020-09-30 20:41 王闯wangchuang2017 阅读(121) 评论(0) 推荐(0) 编辑

Completion of draft bacterial genomes by long-read sequencing of synthetic genomic pools
摘要:Completion of draft bacterial genomes by long-read sequencing of synthetic genomic pools 通过合成基因组库的长读测序完成细菌基因组草图 Hooman Derakhshani, Steve P. Bernier, 阅读全文

posted @ 2020-09-30 20:07 王闯wangchuang2017 阅读(160) 评论(0) 推荐(0) 编辑

Comparative assessment of long-read error correction software applied to Nanopore RNA-sequencing data
摘要:Comparative assessment of long-read error correction software applied to Nanopore RNA-sequencing data 长读纠错软件应用于纳米孔rna测序数据的比较评估 Abstract Motivation Nan 阅读全文

posted @ 2020-09-30 20:05 王闯wangchuang2017 阅读(163) 评论(0) 推荐(0) 编辑

Single-molecule long-read sequencing facilitates shrimp transcriptome research
摘要:Single-molecule long-read sequencing facilitates shrimp transcriptome research 单分子长read测序促进了虾的转录组研究 Abstract Although shrimp are of great economic imp 阅读全文

posted @ 2020-09-30 20:01 王闯wangchuang2017 阅读(309) 评论(0) 推荐(0) 编辑

Benchmarking of long-read assemblers for prokaryote whole genome sequencing
摘要:Benchmarking of long-read assemblers for prokaryote whole genome sequencing 原核生物 全基因组测序的 长read组装的基准 Ryan R. Wick, Conceptualization, Data Curation, Fo 阅读全文

posted @ 2020-09-30 19:58 王闯wangchuang2017 阅读(296) 评论(0) 推荐(0) 编辑

A new era of long-read sequencing for cancer genomics
摘要:A new era of long-read sequencing for cancer genomics 癌症基因组学长read测序的新时代 Yoshitaka Sakamoto, Sarun Sereewattanawoot & Ayako Suzuki Journal of Human Gen 阅读全文

posted @ 2020-09-30 19:41 王闯wangchuang2017 阅读(228) 评论(0) 推荐(0) 编辑

Long-Read Sequencing – A Powerful Tool in Viral Transcriptome Research
摘要:Long-Read Sequencing – A Powerful Tool in Viral Transcriptome Research 长读测序-病毒转录组研究中的一个强大工具 Author links open overlay panelZsoltBoldogkői1NorbertMoldo 阅读全文

posted @ 2020-09-30 19:39 王闯wangchuang2017 阅读(184) 评论(0) 推荐(0) 编辑

Improving and correcting the contiguity of long-read genome assemblies of three plant species using optical mapping and chromosome conformation capture data
摘要:Improving and correcting the contiguity of long-read genome assemblies of three plant species using optical mapping and chromosome conformation captur 阅读全文

posted @ 2020-09-30 19:38 王闯wangchuang2017 阅读(140) 评论(0) 推荐(0) 编辑

Illumina short-read and MinION long-read WGS to characterize the molecular epidemiology of an NDM-1 Serratia marcescens outbreak in Romania
摘要:Illumina short-read and MinION long-read WGS to characterize the molecular epidemiology of an NDM-1 Serratia marcescens outbreak in Romania Illumina s 阅读全文

posted @ 2020-09-30 19:33 王闯wangchuang2017 阅读(177) 评论(0) 推荐(0) 编辑

Comparison of long-read sequencing technologies in the hybrid assembly of complex bacterial genomes
摘要:Comparison of long-read sequencing technologies in the hybrid assembly of complex bacterial genomes 长read测序技术在复杂细菌基因组 杂交组装中的比较 Nicola De Maio, 1 ,† Li 阅读全文

posted @ 2020-09-30 19:32 王闯wangchuang2017 阅读(326) 评论(0) 推荐(0) 编辑

A single-molecule long-read survey of the human transcriptome
摘要:A single-molecule long-read survey of the human transcriptome 对人类转录组的单分子长read调查 Donald Sharon, Hagen Tilgner, Fabian Grubert & Michael Snyder Nature B 阅读全文

posted @ 2020-09-30 19:30 王闯wangchuang2017 阅读(134) 评论(0) 推荐(0) 编辑

Long-read sequencing and de novo assembly of a Chinese genome 一个中国人基因组的长读测序和重新组装
摘要:Abstract Short-read sequencing has enabled the de novo assembly of several individual human genomes, but with inherent limitations in characterizing r 阅读全文

posted @ 2020-09-30 19:28 王闯wangchuang2017 阅读(310) 评论(0) 推荐(0) 编辑

Combination of short-read, long-read, and optical mapping assemblies reveals large-scale tandem repeat arrays with population genetic implications
摘要:Combination of short-read, long-read, and optical mapping assemblies reveals large-scale tandem repeat arrays with population genetic implications 短读、 阅读全文

posted @ 2020-09-30 19:25 王闯wangchuang2017 阅读(122) 评论(0) 推荐(0) 编辑

Reference Grade Characterization of Polymorphisms in Full-Length HLA Class I and II Genes With Short-Read
摘要:Reference Grade Characterization of Polymorphisms in Full-Length HLA Class I and II Genes With Short-Read Sequencing on the ION PGM System and Long-Re 阅读全文

posted @ 2020-09-30 19:20 王闯wangchuang2017 阅读(120) 评论(0) 推荐(0) 编辑

An Improved Melon Reference Genome With Single-Molecule Sequencing Uncovers a Recent Burst of Transposable Elements With Potential Impact on Genes
摘要:An Improved Melon Reference Genome With Single-Molecule Sequencing Uncovers a Recent Burst of Transposable Elements With Potential Impact on Genes 一种改 阅读全文

posted @ 2020-09-30 19:18 王闯wangchuang2017 阅读(153) 评论(0) 推荐(0) 编辑

Long-read sequencing to understand genome biology and cell function
摘要:Long-read sequencing to understand genome biology and cell function 长read测序,以了解基因组生物学和细胞功能 Author links open overlay panelFlorianKraftIngoKurth Show m 阅读全文

posted @ 2020-09-30 19:13 王闯wangchuang2017 阅读(216) 评论(0) 推荐(0) 编辑

Application of DNA- and RNA-based sequencing techniques to tumour tissue samples in the clinical laboratory
摘要:Application of DNA- and RNA-based sequencing techniques to tumour tissue samples in the clinical laboratory 应用基于DNA和rna的测序技术在临床实验室肿瘤组织样本 Author links 阅读全文

posted @ 2020-09-30 19:12 王闯wangchuang2017 阅读(138) 评论(0) 推荐(0) 编辑

Performance difference of graph-based and alignment-based hybrid error correction methods for error-prone long reads
摘要:Performance difference of graph-based and alignment-based hybrid error correction methods for error-prone long reads 针对 容易出错的长读,基于图 和 基于对准 的混合纠错方法的性能差 阅读全文

posted @ 2020-09-30 19:04 王闯wangchuang2017 阅读(274) 评论(0) 推荐(0) 编辑

TALC: Transcription Aware Long Read Correction
摘要:TALC: Transcription Aware Long Read Correction TALC:转录组 意识 长读校正 Lucile Broseus, Aubin Thomas, Andrew J. Oldfield, Dany Severac, Emeric Dubois, William 阅读全文

posted @ 2020-09-30 18:54 王闯wangchuang2017 阅读(94) 评论(0) 推荐(0) 编辑

Comparison of long read sequencing technologies in resolving bacteria and fly genomes 长读测序技术在解决细菌和苍蝇基因组中的比较
摘要:Comparison of long read sequencing technologies in resolving bacteria and fly genomes 长读测序技术在解决细菌和苍蝇基因组中的比较 Eric S. Tvedte, Mark Gasser, Benjamin C. S 阅读全文

posted @ 2020-09-30 18:51 王闯wangchuang2017 阅读(160) 评论(0) 推荐(0) 编辑

Comparative assessment of long-read error-correction software applied to RNA-sequencing data 长读纠错软件应用于RNA测序数据的比较评估
摘要:Comparative assessment of long-read error-correction software applied to RNA-sequencing data 长读纠错软件应用于RNA测序数据的比较评估 View ORCID ProfileLeandro Lima, Vie 阅读全文

posted @ 2020-09-30 18:50 王闯wangchuang2017 阅读(123) 评论(0) 推荐(0) 编辑

Comparative assessment of long-read error correction software applied to Nanopore RNA-sequencing data
摘要:Comparative assessment of long-read error correction software applied to Nanopore RNA-sequencing data 长读纠错软件应用于纳米孔RNA测序数据的比较评估 Leandro Lima, Camille M 阅读全文

posted @ 2020-09-30 18:47 王闯wangchuang2017 阅读(259) 评论(0) 推荐(0) 编辑

Long-read error correction: a survey and qualitative comparison
摘要:Long-read error correction: a survey and qualitative comparison 长读纠错:调查和定性比较 Pierre Morisse, Thierry Lecroq, Arnaud Lefebvre doi: https://doi.org/10.1 阅读全文

posted @ 2020-09-30 18:24 王闯wangchuang2017 阅读(278) 评论(1) 推荐(1) 编辑

Integrated single-molecule long-read sequencing and Illumina sequencing reveal the resistance mechanism of Psathyrostachys huashanica in response to barley yellow dwarf virus-GAV
摘要:Integrated single-molecule long-read sequencing and Illumina sequencing reveal the resistance mechanism of Psathyrostachys huashanica in response to b 阅读全文

posted @ 2020-09-30 18:14 王闯wangchuang2017 阅读(152) 评论(0) 推荐(0) 编辑

2017 2018 湖南省生物信息学会
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posted @ 2020-09-29 15:27 王闯wangchuang2017 阅读(115) 评论(0) 推荐(0) 编辑

2010 浙江 杭州 第四届全国生物信息学与系统生物学学术大会(大会总结) The 4th Chinese Conference on Bioinformatics & Systems Biology, 2010
摘要:第四届全国生物信息学与系统生物学学术大会(大会总结) The 4th Chinese Conference on Bioinformatics & Systems Biology, 2010 “第四届全国生物信息学与系统生物学学术大会”总结,发布日期:2010-10-25 大会总结 第四届全国生物信 阅读全文

posted @ 2020-09-28 20:51 王闯wangchuang2017 阅读(201) 评论(0) 推荐(0) 编辑

2008 武汉 第三届全国生物信息学与系统生物学学术大会
摘要:第三届全国生物信息学与系统生物学学术大会 Jul 22, 2008No Comments 会议名称: 第三届全国生物信息学与系统生物学学术大会会议时间: 2008年10月6-9日会议地点: 湖北省武汉市会议备注: 会议内容:生物信息学研究:从基因组信息学到系统生物学 阅读全文

posted @ 2020-09-28 20:42 王闯wangchuang2017 阅读(116) 评论(0) 推荐(0) 编辑

2014 南京 第六届全国生物信息学与系统生物学学术大会暨国际生物信息学前沿研讨会
摘要:“第六届全国生物信息学与系统生物学学术大会暨国际生物信息学前沿研讨会”将于2014年10月6日—9日在南京东南大学召开。 阅读全文

posted @ 2020-09-28 20:40 王闯wangchuang2017 阅读(115) 评论(0) 推荐(0) 编辑

学习Python(三)
摘要:学习Python(一) https://blog.csdn.net/u010608296/article/details/104561555 7 xpath 首先安装Google的Chrome浏览器 7.1 在chrome浏览器中安装xpath插件 在Chrome浏览器中,访问 chrome://e 阅读全文

posted @ 2020-09-21 21:08 王闯wangchuang2017 阅读(215) 评论(0) 推荐(0) 编辑

2020年中国基因测序产业竞争格局全局观
摘要:2020年中国基因测序产业竞争格局全局观 (2020-07-24 13:31:04) 转载▼ 标签: 行业 ngs 财报 分类: 生物医学 产业链涵盖范围广,发展需求大 从基因测序产业全景图来看,基因测序产业链主要包括了上游仪器、中游服务提供商以及下游终端应用三个环节,产业链看似简单,但是其下游终端 阅读全文

posted @ 2020-09-21 18:13 王闯wangchuang2017 阅读(191) 评论(0) 推荐(0) 编辑

Improving and correcting the contiguity of long-read genome assemblies of three plant species using optical mapping and chromosome conformation capture data
摘要:Improving and correcting the contiguity of long-read genome assemblies of three plant species using optical mapping and chromosome conformation captur 阅读全文

posted @ 2020-09-21 18:12 王闯wangchuang2017 阅读(128) 评论(0) 推荐(0) 编辑

单细胞测序及生物信息学分析高峰论坛暨肿瘤标志物新技术全国推广培训
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posted @ 2020-09-20 09:08 王闯wangchuang2017 阅读(239) 评论(0) 推荐(0) 编辑

SQL连接
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posted @ 2020-09-09 18:58 王闯wangchuang2017 阅读(160) 评论(0) 推荐(0) 编辑

JDK安装与环境变量配置
摘要:JDK安装与环境变量配置 2018-11-08 20:28:07 导语:安装JDK 选择安装目录 安装过程中会出现两次 安装提示 。第一次是安装 jdk ,第二次是安装 jre 。建议两个都安装在同一个java文件夹中的不同文件夹中。 安装JDK 选择安装目录 安装过程中会出现两次 安装提示 。第一 阅读全文

posted @ 2020-09-09 14:34 王闯wangchuang2017 阅读(100) 评论(0) 推荐(0) 编辑

如何用记事本编写Java代码
摘要:如何用记事本编写Java代码 2019-02-06 18:29:28 导语:如果你的电脑上不能显示文件的扩展名,请这样做:双击“我的电脑”,点击左上角的“查看”选项,在“文件扩展名”前面的方框里打“√”。 1.在任意位置(我放到G盘根目录了)新建一个文本文档,并将名字连同扩展名改为“HelloWor 阅读全文

posted @ 2020-09-09 14:33 王闯wangchuang2017 阅读(242) 评论(0) 推荐(0) 编辑

系统U盘制作教程
摘要:系统U盘制作教程 工具/资源 UltraISO(软碟通)点击下载Windows ISO镜像文件U盘(大于4G) 一、下载UltraISO,并安装注册 百度下载UltraISO,双击安装 二、制作系统U盘。右键点击UltraISO桌面快捷方式,选择以管理员身份运行 选择下载好的镜像ISO文件 点击启动 阅读全文

posted @ 2020-09-08 20:09 王闯wangchuang2017 阅读(322) 评论(0) 推荐(0) 编辑

Illumina 最新的 HiSeq X Ten 让 1,000 美元一次的 DNA 测序成为现实
摘要:Illumina 最新的 HiSeq X Ten 让 1,000 美元一次的 DNA 测序成为现实 Sanji Feng 2014年01月16日, 上午 09:00 回首 10 年前,做一次 DNA 测序的花费相当之高,总的加起来大约在 25 万美元左右。而这样的数字显然不利于其普及,所以研究者们一 阅读全文

posted @ 2020-09-07 20:15 王闯wangchuang2017 阅读(315) 评论(0) 推荐(0) 编辑

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