吴裕雄--天生自然 PYTHON数据分析：糖尿病视网膜病变数据分析(续二)

def circle_crop(img, sigmaX=10):   
    """
    Create circular crop around image centre    
    """    
    img = cv2.imread(img)
    img = crop_image_from_gray(img)    
    img = cv2.cvtColor(img, cv2.COLOR_BGR2RGB)
    height, width, depth = img.shape    
    x = int(width/2)
    y = int(height/2)
    r = np.amin((x,y))
    circle_img = np.zeros((height, width), np.uint8)
    cv2.circle(circle_img, (x,y), int(r), 1, thickness=-1)
    img = cv2.bitwise_and(img, img, mask=circle_img)
    img = crop_image_from_gray(img)
    img=cv2.addWeighted ( img,4, cv2.GaussianBlur( img , (0,0) , sigmaX) ,-4 ,128)
    return img 

%%time
## try circle crop
NUM_SAMP=7
fig = plt.figure(figsize=(25, 16))
for class_id in sorted(train_y.unique()):
    for i, (idx, row) in enumerate(df_train.loc[df_train['diagnosis'] == class_id].sample(NUM_SAMP, random_state=SEED).iterrows()):
        ax = fig.add_subplot(5, NUM_SAMP, class_id * NUM_SAMP + i + 1, xticks=[], yticks=[])
        path="F:\\kaggleDataSet\\diabeticRetinopathy\\resized train 19\\"+str(row['id_code'])+".jpg"
        image = circle_crop(path,sigmaX=30)
        plt.imshow(image)
        ax.set_title('%d-%d-%s' % (class_id, idx, row['id_code']) )

dpi = 80 #inch
path="F:\\kaggleDataSet\\diabeticRetinopathy\\resized train 19\\cd54d022e37d.jpg"
image = load_ben_color(path,sigmaX=10)

height, width = IMG_SIZE, IMG_SIZE
print(height, width)

SCALE=1
figsize = (width / float(dpi))/SCALE, (height / float(dpi))/SCALE

fig = plt.figure(figsize=figsize)
plt.imshow(image, cmap='gray')

%%time
NUM_SAMP=10
fig = plt.figure(figsize=(25, 16))
for jj in range(5):
    for i, (idx, row) in enumerate(df_test.sample(NUM_SAMP,random_state=SEED+jj).iterrows()):
        ax = fig.add_subplot(5, NUM_SAMP, jj * NUM_SAMP + i + 1, xticks=[], yticks=[])
        path="F:\\kaggleDataSet\\diabeticRetinopathy\\resized test 19\\"+str(row['id_code'])+".jpg"
        image = load_ben_color(path,sigmaX=30)
        plt.imshow(image)
        ax.set_title('%d-%s' % (idx, row['id_code']) )