How can I prepare a FASTA file to use as reference

.fasta -> .dict

picard.jar CreateSequenceDictionary R=indexdb/tair10_chr_all.fa O=indexdb/tair10_chr_all.dict

.fasta -> .fai

samtools faidx indexdb/tair10_chr_all.fa\

Reference

  1. 2012.10 How can I prepare a FASTA file to use as reference
  2. samtools faidx 命令处理fasta序列
posted @ 2017-04-04 04:02  乌祁班岚图  阅读(454)  评论(0)  编辑  收藏  举报