10 2012 档案

[QWERT] Locate non-zero numbers start and end from a string of numbers
摘要：Input is a string of numbers:0012300123400012012311Output will list the none-zero numbers' start and length.Perl语言: 高亮代码由发芽网提供my $nums = shift;my $output = &cluster($nums);print $output . "\n";sub cluster{ my $nums = $_[0]; my @nums = (split //,$nums); my $indicator = 0; my $len = 阅读全文
posted @ 2012-10-23 10:22 Puriney 阅读(165) 评论(0) 推荐(0) 编辑
Reproduce ENCODE/CSHL Long RNA-seq data visualization[2]--coSI
摘要：% Boxplot coSI exons % Yun YAN % Oct 9, 2012MotivationReproduce the boxplot of the coSI shown in the original paper Figure2 with the graphic tool ggplot.Data SetRaw data is suggested to be formated for friendly usage in R console.Data ProcessingHere I calculate the relative distance to the polyA sit 阅读全文
posted @ 2012-10-09 17:26 Puriney 阅读(286) 评论(0) 推荐(0) 编辑
Reproduce ENCODE/CSHL Long RNA-seq data visualization viewed in UCSC
摘要：MotivationThe ENCODE data comes out, and luckily they provide both.bamfile and.bigwigfile. Thus, it occurs to me that I want to give a try to reproduce the data visualization with tool:BEDtoolsand other related tools.ResultI'll first upload the difference between my-version and official version: 阅读全文
posted @ 2012-10-06 21:27 Puriney 阅读(649) 评论(0) 推荐(0) 编辑