利用picard对参考基因组构建dict文件
1、方式1
root@DESKTOP-1N42TVH:/home/test/test2# ls Arabidopsis_thaliana.TAIR10.dna.toplevel.fa root@DESKTOP-1N42TVH:/home/test/test2# java -jar /home/software/picard/build/libs/picard.jar CreateSequenceDictionary R=Arabidopsis_thaliana.TAIR10.dna.toplevel.fa O=Arabidopsis_thaliana.TAIR10.dna.toplevel.fa.dict
root@DESKTOP-1N42TVH:/home/test/test2# ls
Arabidopsis_thaliana.TAIR10.dna.toplevel.fa Arabidopsis_thaliana.TAIR10.dna.toplevel.fa.dict
2、方式2:
[root@8ec9dd73f438 09:49:52 /work/my_reseq/ref/test2]# ls Arabidopsis_thaliana.TAIR10.dna.toplevel.fa [root@8ec9dd73f438 09:49:53 /work/my_reseq/ref/test2]# picard CreateSequenceDictionary R=Arabidopsis_thaliana.TAIR10.dna.toplevel.fa O=Arabidopsis_thaliana.TAIR10.dna.toplevel.fa.dict
[root@8ec9dd73f438 09:50:06 /work/my_reseq/ref/test2]# ls Arabidopsis_thaliana.TAIR10.dna.toplevel.fa Arabidopsis_thaliana.TAIR10.dna.toplevel.fa.dict