linux系统centos7.9安装R（编译安装）
查看系统：
[root@centos7 ~]# cat /etc/redhat-release
CentOS Linux release 7.9.2009 (Core)
[root@centos7 ~]# hostnamectl
Static hostname: centos7
Icon name: computer-vm
Chassis: vm
Machine ID: 800a83c5a11f46b5bcfb4fd5700d3f0e
Boot ID: 0c55cc128ec04b689715398316da76a4
Virtualization: vmware
Operating System: CentOS Linux 7 (Core)
CPE OS Name: cpe:/o:centos:centos:7
Kernel: Linux 3.10.0-1160.el7.x86_64
Architecture: x86-64
1、下载R安装包
[root@centos7 home]# wget https://mirror.bjtu.edu.cn/cran/src/base/R-3/R-3.6.3.tar.gz
--2021-01-31 23:52:23-- https://mirror.bjtu.edu.cn/cran/src/base/R-3/R-3.6.3.tar.gz
Resolving mirror.bjtu.edu.cn (mirror.bjtu.edu.cn)... 202.112.154.58, 2001:da8:205::58
Connecting to mirror.bjtu.edu.cn (mirror.bjtu.edu.cn)|202.112.154.58|:443... connected.
HTTP request sent, awaiting response... 200 OK
Length: 33308185 (32M) [application/octet-stream]
Saving to: ‘R-3.6.3.tar.gz’
100%[===============================================================================>] 33,308,185 72.4MB/s in 0.4s
2021-01-31 23:52:23 (72.4 MB/s) - ‘R-3.6.3.tar.gz’ saved [33308185/33308185]
[root@centos7 home]# ls
liujiaxin01 R-3.6.3.tar.gz
[root@centos7 home]# tar -xzvf R-3.6.3.tar.gz
[root@centos7 home]# cd R-3.6.3/
[root@centos7 R-3.6.3]# ls
ChangeLog configure.ac etc Makeconf.in po src tools
config.site COPYING INSTALL Makefile.fw README SVN-REVISION VERSION
configure doc m4 Makefile.in share tests VERSION-NICK
2、编译
[root@centos7 R-3.6.3]# ./configure --enable-R-shlib
checking build system type... x86_64-pc-linux-gnu
checking host system type... x86_64-pc-linux-gnu
loading site script './config.site'
loading build-specific script './config.site'
checking for pwd... /usr/bin/pwd
checking whether builddir is srcdir... yes
checking whether ln -s works... yes
checking for ar... ar
checking for a BSD-compatible install... /usr/bin/install -c
checking for sed... /usr/bin/sed
checking for which... /usr/bin/which
checking for less... /usr/bin/less
checking for gtar... /usr/bin/gtar
checking for tex... no
checking for pdftex... no
configure: WARNING: you cannot build PDF versions of the R manuals
checking for pdflatex... no
configure: WARNING: you cannot build PDF versions of vignettes and help pages
checking for makeindex... no
checking for texi2any... no
configure: WARNING: you cannot build info or HTML versions of the R manuals
checking for texi2dvi... no
checking for kpsewhich... no
checking for latex inconsolata package... checking for unzip... /usr/bin/unzip
checking for zip... /usr/bin/zip
checking for gzip... /usr/bin/gzip
checking for bzip2... /usr/bin/bzip2
checking for firefox... /usr/bin/firefox
using default browser ... /usr/bin/firefox
checking for acroread... no
checking for acroread4... no
checking for xdg-open... /usr/bin/xdg-open
checking for working aclocal... missing
checking for working autoconf... missing
checking for working autoheader... missing
checking for bison... no
checking for byacc... no
checking for yacc... no
checking for notangle... false
checking for realpath... /usr/bin/realpath
checking for pkg-config... /usr/bin/pkg-config
checking for gcc... no
checking for cc... no
checking for cl.exe... no
configure: error: in `/home/R-3.6.3':
configure: error: no acceptable C compiler found in $PATH ## 报错
See `config.log' for more details
3、
[root@centos7 R-3.6.3]# yum install gcc-c++ -y
……
Installed:
gcc-c++.x86_64 0:4.8.5-44.el7
Dependency Installed:
cpp.x86_64 0:4.8.5-44.el7 gcc.x86_64 0:4.8.5-44.el7 libstdc++-devel.x86_64 0:4.8.5-44.el7
Complete!
4、
[root@centos7 R-3.6.3]# ./configure --enable-R-shlib
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checking whether we are using the GNU Fortran compiler... no
checking whether accepts -g... no
configure: error: No Fortran compiler found
5、
[root@centos7 R-3.6.3]# yum install gcc-gfortran -y
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Dependency Installed:
libgfortran.x86_64 0:4.8.5-44.el7 libquadmath.x86_64 0:4.8.5-44.el7 libquadmath-devel.x86_64 0:4.8.5-44.el7
Complete!
6、
[root@centos7 R-3.6.3]# ./configure --enable-R-shlib
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checking for main in -ltermlib... no
checking for rl_callback_read_char in -lreadline... no
configure: error: --with-readline=yes (default) and headers/libs are not available
7、
[root@centos7 R-3.6.3]# yum install readline-devel -y
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Dependency Installed:
ncurses-devel.x86_64 0:5.9-14.20130511.el7_4
Complete!
8、
[root@centos7 R-3.6.3]# ./configure --enable-R-shlib
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checking X11/Intrinsic.h presence... no
checking for X11/Intrinsic.h... no
configure: error: --with-x=yes (default) and X11 headers/libs are not available
9、
[root@centos7 R-3.6.3]# yum install libXt-devel -y
Dependency Installed:
libICE-devel.x86_64 0:1.0.9-9.el7 libSM-devel.x86_64 0:1.2.2-2.el7
Complete!
10、
[root@centos7 R-3.6.3]# ./configure --enable-R-shlib
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checking for inflateInit2_ in -lz... no
checking whether zlib support suffices... configure: error: zlib library and headers are required
11、
[root@centos7 R-3.6.3]# yum install zlib-devel -y
…………
…………
Installed:
zlib-devel.x86_64 0:1.2.7-18.el7
Complete!
12、
[root@centos7 R-3.6.3]# ./configure --enable-R-shlib
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checking mmap support for zlib... yes
checking for BZ2_bzlibVersion in -lbz2... no
checking whether bzip2 support suffices... configure: error: bzip2 library and headers are required
13、
[root@centos7 R-3.6.3]# yum -y install bzip2-devel
…………
…………
Installed:
bzip2-devel.x86_64 0:1.0.6-13.el7
Complete!
14、
[root@centos7 R-3.6.3]# ./configure --enable-R-shlib
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checking for lzma_version_number in -llzma... no
configure: error: "liblzma library and headers are required"
15、
[root@centos7 R-3.6.3]# yum -y install xz-devel.x86_64
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…………
Installed:
xz-devel.x86_64 0:5.2.2-1.el7
Complete!
16、
[root@centos7 R-3.6.3]# ./configure --enable-R-shlib
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checking for pcre_fullinfo in -lpcre... no
checking whether PCRE support suffices... configure: error: pcre >= 8.20 library and headers are required
17、
[root@centos7 R-3.6.3]# yum install pcre-devel -y
…………
…………
Installed:
pcre-devel.x86_64 0:8.32-17.el7
Complete!
18、
[root@centos7 R-3.6.3]# ./configure --enable-R-shlib
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checking for curl/curl.h... no
configure: error: libcurl >= 7.22.0 library and headers are required with support for https
19、
[root@centos7 R-3.6.3]# yum install curl curl-devel -y
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…………
Updated:
curl.x86_64 0:7.29.0-59.el7_9.1
Dependency Updated:
libcurl.x86_64 0:7.29.0-59.el7_9.1
Complete!
20、
[root@centos7 R-3.6.3]# ./configure --enable-R-shlib
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Capabilities skipped: PNG, JPEG, TIFF, cairo, ICU
Options not enabled: memory profiling
Recommended packages: yes
configure: WARNING: you cannot build info or HTML versions of the R manuals
configure: WARNING: you cannot build PDF versions of the R manuals
configure: WARNING: you cannot build PDF versions of vignettes and help pages
21、
[root@centos7 R-3.6.3]# make
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gcc -std=gnu99 -I"/home/R-3.6.3/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c conftest.c -o conftest.o
conftest.c:1:17: fatal error: jni.h: No such file or directory
#include <jni.h>
^
compilation terminated.
make[2]: *** [conftest.o] Error 1
make[2]: Leaving directory `/tmp/Rjavareconf.ZNGgzx'
Unable to compile a JNI program
JAVA_HOME : /usr/lib/jvm/java-1.8.0-openjdk-1.8.0.262.b10-1.el7.x86_64/jre
Java library path:
JNI cpp flags :
JNI linker flags :
Updating Java configuration in /home/R-3.6.3
Done.
make[1]: Leaving directory `/home/R-3.6.3'
22、
[root@centos7 R-3.6.3]# yum -y install java-1.8.0-openjdk java-1.8.0-openjdk-devel
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Dependency Updated:
java-1.8.0-openjdk-headless.x86_64 1:1.8.0.282.b08-1.el7_9 tzdata-java.noarch 0:2021a-1.el7
Complete!
23、
[root@centos7 R-3.6.3]# make
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make[1]: Leaving directory `/home/R-3.6.3/src/library'
make[1]: Entering directory `/home/R-3.6.3'
make[1]: `stamp-java' is up to date.
make[1]: Leaving directory `/home/R-3.6.3'
24、
[root@centos7 R-3.6.3]# make install
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make[2]: Leaving directory `/home/R-3.6.3/src/library'
make[1]: Leaving directory `/home/R-3.6.3/src'
make[1]: Entering directory `/home/R-3.6.3/tests'
make[1]: Nothing to be done for `install'.
make[1]: Leaving directory `/home/R-3.6.3/tests'
25、测试R
[root@centos7 R-3.6.3]# R
R version 3.6.3 (2020-02-29) -- "Holding the Windsock"
Copyright (C) 2020 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
Natural language support but running in an English locale
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> 2 + 5
[1] 7
> 10 * 5
[1] 50
> quit()
安装完成。
参考：
https://blog.csdn.net/stone1116/article/details/112986790
https://blog.csdn.net/wumiqing1/article/details/54232345
https://blog.csdn.net/john_f_lau/article/details/17652523
http://blog.sina.com.cn/s/blog_6caea8bf0100zfbu.html
https://blog.csdn.net/weixin_43404791/article/details/108980273
