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1. Trinity进行转录组组装Trinity进行转录组组装的典型命令如下:$ /opt/biosoft/trinityrnaseq_r20131110/Trinity.pl --seqType fq --JM 50G\ --left sample1_1.clean.fastq sample2_1.clean.fastq\ --right sample1_2.clean.fastq sample2_2.clean.fastq\ --jaccard_clip --CPU 6 --SS_lib_type FR–JM后的参数设定与转录组的大小有关，在内存足够的情况下，设定大点能节约时间；–left 阅读全文
摘要：
原文：http://www.biostars.org/p/53528/This tutorial also serves as the supporting information for Lecture 9 of the course titledAnalyzing High Througput Sequencing Dataoffered at Penn State.Within this tutorial we compare the efficiency and characteristics of several software tools designed to filter F 阅读全文