相邻节点数量条形图
结果图展示
该条形图展示的是相邻节点数(number of adjacent nodes)最高的前几位节点。
输入数据
该输入数据的每一行都显示的是两个存在连接的相邻节点(adjacent nodes)。
![](https://images.cnblogs.com/OutliningIndicators/ContractedBlock.gif)
node1 node2 RAD51 MND1 ZWINT BUB1B IL33 IL1RL1 CDC20 BUB1B CDC20 CCNB2 CDCA8 AURKB MCM10 CDC6 CDC25C CCNB1 NEK2 BUB1B HJURP CENPA CDC20 UBE2C ANGPT1 TEK CALCRL RAMP2 CDC20 CCNB1 GATA1 LMO2 CCNB2 CCNB1 PLK1 CCNB1 CDC20 AURKB CDC20 NEK2 CDCA8 CDC20 CDCA8 BIRC5 TAL1 LMO2 KIF20A MAD2L1 NCAPG NCAPH MAD2L1 BUB1B GINS1 GINS2 AURKB CCNB2 NEK2 MAD2L1 CDC20 PLK1 AURKB BUB1B TSTA3 GMDS CDC20 MAD2L1 KIF20A AURKB KIF2C AURKB MAD2L1 CCNB1 UBE2C CCNB1 KIF2C PLK1 PLK1 CCNB2 MAD2L1 CCNB2 CDCA8 MAD2L1 CDCA8 CCNB1 AURKB BIRC5 PLK1 MAD2L1 CDC20 KIF2C BIRC5 MAD2L1 TTK MAD2L1 CDC25A CCNB1 AURKB MAD2L1 CDCA8 PLK1 AURKB CCNB1 BUB1B CCNB1 CDC20 BIRC5 ZWINT NUF2 NPNT ITGA8 HPD HGD PLK1 BUB1B CENPA AURKB AURKB NCAPG FIGF FLT4 CDCA8 KIF2C FOXM1 CCNB1 KIF20A PLK1 VIP VIPR1 CDC25C PLK1 CDC20 TTK AURKB NCAPH KIF2C BUB1B RAD51 EXO1 AURKB PLK1 CDCA8 BUB1B CX3CR1 CX3CL1 UBE2C BUB1B CDH5 KDR CDCA8 CCNB2 CCNB2 BUB1B UBE2C MAD2L1 FOXM1 PLK1 MAD2L1 NUF2 TOP2A TPX2 UBE2C AURKB HMMR TPX2 ECT2 PLK1 KIF2C CCNB1 KIF2C CCNB2 CDC20 NUF2 BUB1B NUF2 KIF20A CDCA8 CALCRL RAMP3 BIRC5 BUB1B MYH3 ACTN2 BIRC5 CCNB1 AURKB NUF2 CCNB2 NCAPG FIGF KDR TPX2 PLK1 HIST1H2AC HIST1H2BD KIF20A KIF4A TTK BUB1B BIRC5 CCNB2 GATA1 TAL1 UBE2C PLK1 CDCA8 NUF2 GTSE1 PLK1 CENPA BUB1B DSP DSG2 GNRH1 KISS1R FGFR4 FGF2 CDCA8 CDCA5 HIST1H4H CENPA AURKB CDCA5 ITGAL ICAM5 KIF20A KIF2C UBE2C CCNB2 KIF2C CENPA HIST1H4E CENPA TENC1 DLC1 ZWINT AURKB NEK2 TPX2 KIF20A BIRC5 SFTPA1 SFTPC SH3GL2 SH3GL3 EFNA4 EPHA10 SFTPA2 SFTPC KIF2C BIRC5 FOXM1 MYBL2 TTK NCAPG PLK1 NUF2 DSP PKP3 LCAT APOA1 TPX2 DLGAP5 ZWINT MAD2L1 ATP1B1 ATP1A2 PBK TOP2A KIF2C MAD2L1 FOXM1 CCNB2 CCNB2 NUF2 TOP2A UBE2C KIF4A KIF2C CCNB1 MYBL2 BIRC5 CDCA5 CDC25C CCNB2 BIRC5 PLK1 PKP3 DSG2 CDCA8 CENPA NUSAP1 CDC20 IL18R1 IL18RAP CDC20 CDCA5 CDC20 CENPA GATA2 LMO2 CENPA MAD2L1 ZWINT CENPA NEK2 UBE2C PLK1 CDCA5 CENPA CCNB1 CCNB1 NCAPG GATA2 TAL1 CCNB2 CDCA5 CDC20 DLGAP5 NUSAP1 DLGAP5 CENPA CCNB2 KIF2C NUF2 CDCA5 NUF2 MAD2L1 NCAPG BIRC5 NUF2 ITGA2B VWF NUSAP1 NCAPG CCNB1 CDC6 TTK NUF2 NUF2 CCNB1 CCNB2 NCAPH CENPA PLK1 ZWINT CDC20 FOXM1 CDC25A TTK DLGAP5 CENPA BIRC5 CENPA NUF2 CDCA8 TTK TOP2A NCAPG PECAM1 CDH5 FCN1 MASP1 ZWINT KIF2C ZWINT CCNB2 FGFR4 KLB TOP2A DLGAP5 TNNT2 TNNC1 CCNB1 DLGAP5 KCNA4 KCNAB3 CDC20 FOXM1 SHC3 NTRK2 ACTN2 TNNT2 EDNRB EDN2 ZWINT BIRC5 TOP2A CDC20 AURKB TPX2 CCNB2 DLGAP5 ZWINT CCNB1 PBK MAD2L1 HIST1H2AC CENPA PBK CCNB1 TOP2A CCNB1 TOP2A CCNB2 GTSE1 CCNB2 NCAPG DLGAP5 BUB1B CDCA5 TOP2A KIF4A RGS9BP RGS9 ZWINT CDCA8 SFTPD SFTPC HMMR PLK1 TOP2A KIF20A NUSAP1 TOP2A ZWINT CDCA5 HMMR NEK2 SKA3 BUB1B PECAM1 KDR CACNB4 CACNA2D2 UBE2C CDC6 FUT2 FUT3 TTK CCNB2 UBE2C BIRC5 CCNB1 NCAPH TOP2A BUB1B ACTN2 LDB3 CDC25A CCNB2 THBD PROC CDC25A PLK1 ATP1A2 ATP1B2 CENPA CDCA5 CAV1 CAV2 MASP1 FCN3 CALCRL ADM2 NUSAP1 CDCA8 KIF4A AURKB HIST1H4E HIST1H4H KIF20A CCNB1 CDCA5 CCNB1 CCNB2 MYBL2 UBE2C DLGAP5 KIF4A TPX2 TTK AURKB KIF20A DLGAP5 MAD2L1 CDCA5 TOP2A AURKB NEK2 CCNB2 MCM10 GINS2 KIF20A CDC20 WNT3A SFRP1 KIF20A CCNB2 KIF2C CDCA5 CDC20 MELK SPP1 MMP7 ALDH1A2 CYP26B1 NUSAP1 CCNB2 HMMR DLGAP5 UBE2T UBE2C CAMP PRTN3 PBK MELK LDB2 LMO2 ANGPT4 TEK KIF2C TPX2 BUB1B DLGAP5 CDCA3 CDC20 ADM2 RAMP3 KIF20A TPX2 TOP2A RRM2 TNNT3 TNNC1 PLK1 MYBL2 NUSAP1 CEP55 PBK CDC20 PBK PLK1 UBE2C TPX2 ADM2 RAMP2 GPC3 GOLM1 MYH3 TNNT3 HOXA6 HOXA5 NUSAP1 MAD2L1 CDCA8 UBE2C SERPING1 KLKB1 CDC20 CDC6 NUSAP1 PLK1 CCNB2 CDC6 ACTN2 TNNT3 PBK DLGAP5 PBK BIRC5 SCN1A SCN2B GP9 VWF KRT6A KRT17 TOP2A TTK AURKB DLGAP5 GTSE1 CCNB1 TPX2 CCNB1 NUF2 NCAPG PBK TTK NEK2 PLK1 KIF20A BUB1B CDCA8 DLGAP5 RRM2 BUB1B NUF2 DLGAP5 FUT2 FUT6 NUSAP1 UBE2C PLK1 DLGAP5 ACTN2 TCAP FGF2 KDR PBK BUB1B GINS2 CDC6 CA9 EPAS1 A2M SERPING1 SLIT2 DCC PBK CCNB2 HOXB7 HOXA5 A2M APOA1 MELK CCNB2 CDC20 RRM2 NUSAP1 TPX2 ZWINT PLK1 TCAP TNNT2 FHL5 KIF17 GATA1 ITGA2B SFN CDC25C SFTPA1 SFTPA2 HKDC1 HK3 VIPR1 RAMP2 MUC5B MUC20 KIF4A BUB1B MELK DLGAP5 DCC SLIT3 CXCL12 CX3CL1 PPBP VWF KIF20A CEP55 CDCA3 CDCA8 A2M KLKB1 PTGES PTGIS KIF20A NCAPG SCN4B SCN1A CEP55 DLGAP5 KIF4A PLK1 COLEC10 MASP1 NUSAP1 KIF20A TPX2 MELK HOXB7 HOXA6 KIF20A UBE2C KIF4A CCNB2 WIF1 WNT3A CDC20 NCAPG TTK CCNB1 MELK CCNB1 KIF4A DLGAP5 CD36 FABP4 TOP2A MELK NUSAP1 PBK TOP2A CEP55 VIPR1 RAMP3 NUSAP1 TTK GCNT3 B3GNT3 KIF4A CDC20 CXCL12 PPBP TPX2 NCAPG PTGDS PTGES NUSAP1 AURKB CEP55 TTK FOXM1 MELK COLEC10 FCN3 TOP2A KIF2C CXCL12 CX3CR1 C7 CFP NUSAP1 RRM2 MYH3 TNNT2 BIRC5 TPX2 CDCA8 TPX2 PTH1R RAMP2 NUSAP1 BUB1B NUSAP1 NUF2 PBK KIF20A TPX2 CCNB2 NPFF KISS1R SPARCL1 SPP1 CDCA3 CCNB2 TOP2A KIAA0101 PLK1 NCAPG CSAD CDO1 RRM2 MELK TOP2A CDCA8 CDCA3 PBK THBD F10 ITGA8 VTN HNF4G HNF1A KIF20A NEK2 NEK2 DLGAP5 PTRF CAV1 CDCA3 TOP2A GSTM5 GSTM2 PBK UBE2C PBK NCAPG KIF4A NCAPH RRM2 CCNB2 LCN2 CAMP TTK PLK1 GATA1 HEY1 RRM2 UBE2C CDC25C CDC25A CP APOA1 CDC20 TPX2 ECT2 CDC20 HIST1H4E HIST1H2AE CEP55 UBE2C CDCA3 UBE2C CDCA8 NEK2 MAD2L1 DLGAP5 KIF2C DLGAP5 ITGA2B VTN CEP55 RRM2 MFAP4 FBLN5 GINS2 NCAPG PBK CEP55 SFTPA1 SFTPD NEK2 CCNB1 LRRC4B PTPRD CDC20 KIAA0101 TOP2A NEK2 KIF2C UBE2C B3GNT6 GCNT3 KIF20A TTK CDKN3 CCNB1 F10 VWF TOP2A NCAPH CEP55 CCNB1 KIF20A ECT2 NUSAP1 BIRC5 ROBO3 SLIT3 PBK RRM2 HMMR LYVE1 PPAP2C SGPP2 RRM2 CCNB1 CEP55 BUB1B SYN2 STX1A MASP2 SERPING1 PTK6 KHDRBS2 CRLF1 CNTFR CDCA8 NCAPG PTGDS PTGIS MMP1 CMA1 MELK NCAPG A2M VWF NUSAP1 KIF2C PBK TPX2 KDR FLT4 SFN CCNB1 KIF2C TTK SLIT2 ROBO4 TOP2A BIRC5 TTK BIRC5 KIF4A MELK CDC20 CEP55 MUC20 GCNT3 B3GNT6 ST6GALNAC1 TPX2 NUF2 BIRC5 DLGAP5 TPX2 BUB1B PBK NUF2 CFD SERPING1 TOP2A PLK1 DUOX1 DUOXA1 RRM2 DLGAP5 ARHGEF15 RHOJ KIF4A BIRC5 KDR VTN UBE2C FOXM1 NFASC SCN1A HIST1H2AL HIST1H2BD HIST1H4E HIST1H2AM KIF20A RRM2 HIST1H2AL HIST1H2AC ESCO2 CDC6 KIF2C NEK2 CALCRL VIP HIST1H4E HIST1H2AL KCNB1 KCNAB3 CEP55 PLK1 DEPDC1 DLGAP5 HIST1H2AC HIST1H2AM TRPC1 TRPC3 MELK BUB1B MUC20 B3GNT3 CDCA8 MELK DEPDC1 TOP2A PRTN3 CTSG KIF20A FOXM1 NUSAP1 ESCO2 AURKB ESCO2 KIF2C CEP55 GNRH1 NPFF LCN2 TCN1 MAOB PNMT P2RX2 P2RX1 DES TCAP CDCA8 CEP55 DES AURKB ECT2 MELK ACTN2 DES ACTN2 TNNC1 FGF2 KAL1 RRM2 AURKB CEP55 NCAPG RRM2 NCAPG HIST1H4H HIST1H2AE VIP ADRB2 ADRA1D EDN2 UBE2C KIAA0101 KIF4A NCAPG TTK TPX2 NUSAP1 NEK2 FOXA3 HNF1A TOP2A FOXM1 BIRC5 NCAPG KIF4A CCNB1 TPX2 NCAPH CA9 HIF3A KIF2C TROAP B3GNT3 FUT6 MDGA1 NTNG1 FXYD6 ATP1A2 SPARCL1 GPC3 MFAP4 FBLN1 SLIT2 CXCL12 TOP2A MAD2L1 MAOB AOC3 FOXM1 AURKB STX1A SLC17A7 KIAA0101 CCNB2 CP PROC KIF20A ANLN SCN7A SCN4B CEP55 MELK ACVRL1 CAV1 CDCA3 KIF20A CXCL12 S1PR1 VIP PTH1R SFTPA2 SFTPD NGEF RHOV PPBP CX3CL1 NEK2 BIRC5 PDGFB FIGF NUSAP1 HJURP GRIA1 CACNG4 RRM2 TPX2 PBK CDCA8 MMP1 MMP7 EDN2 ADRA1B KIF4A UBE2C AMN APOA1 PDGFB VWF CDCA7 CDC6 EDN2 GNRH1 CEP55 FOXM1 KIF4A CDCA8 B3GNT6 MUC20 RHOJ NGEF ESCO2 NCAPG PBK KIF2C HIF3A EPAS1 CYP3A7 CYP1A2 DES TNNT2 CDCA8 RRM2 ADRA1A ADRA1B DLC1 TNS1 MMRN1 VWF BIRC5 MELK CDCA3 KIAA0101 TTK RRM2 KRT80 KRT17 EDNRB GNRH1 CTHRC1 WNT3A GPC3 APOA1 B3GNT3 FUT3 FBLN1 VTN CDCA3 BIRC5 SPP1 GPC3 SCN7A SCN2B RRM2 BIRC5 FOXM1 BUB1B ANGPT1 KDR KRT4 KRT17 UBE2C MELK PLK1 CDC6 HIST1H4H HIST1H2AM TOP2A TROAP CCL16 CXCL12 HMMR NCAPG MMP1 CTSG NFASC SCN4B MELK MAD2L1 HTR3A HTR3C PBK HMMR VWF PROC RRM2 MAD2L1 FCN1 COLEC10 KIAA0101 BUB1B FXYD1 ATP1A2 RRM2 KIAA0101 NUSAP1 MELK HIST1H2AL HIST1H4H PRELP OGN COL11A1 COL10A1 PDGFB KDR CDC20 NCAPH FOXM1 TPX2 MYH3 TCAP SERPING1 VWF UBE2C CENPA MASP2 MASP1 E2F8 RRM2 CCL16 PPBP CACNB4 CACNG4 DEPDC1 BUB1B TNNT3 TMOD1 ECT2 ANLN KIF20A KIAA0101 KIF2C RRM2 PTH1R RAMP3 HNF4A HNF1A E2F8 BUB1B CDCA8 FOXM1 APOA1 PROC NUSAP1 CCNB1 KIAA0101 DLGAP5 TCAP TNNT3 NUSAP1 KIAA0101 FLT4 LYVE1 CAV1 WNT3A KIF26B KIF20A HJURP DLGAP5 PDGFB A2M COX6B2 COX4I2 TOP2A NEIL3 CENPA HIST1H2BD FIGF VWF PBK KIF4A A2M MMP1 E2F8 CDCA8 RRM2 NME1 KIF4A NEK2 P2RX6 P2RX2 NUSAP1 KIF4A BCO1 ALDH1A2 KIF2C FOXM1 MYH3 TNNC1 SPP1 APOA1 CYR61 SPP1 FXYD6 ATP1B2 FBLN5 VTN FXYD1 ATP1B1 RAMP2 RAMP3 GTSE1 KIF2C ANLN DLGAP5 ADRA1A ADRA1D CDC20 TROAP TMOD1 TNNT2 HJURP KIF20A NOS1 OTC AURKB KIAA0101 CDCA3 KIF2C MCEMP1 P2RX1 SELP VWF TTK MELK TCAP TNNC1 SYNE1 SYNE3 KIF20A MELK CDCA3 DLGAP5 ADRA1A EDN2 VIP PTGIR CCL16 CX3CL1 STARD13 RHOV PLK1 HIST1H2BD GPIHBP1 APOA1 NFASC SCN2B CX3CR1 S1PR5 CAMP PPBP CACNA2D2 CACNG4 HMMR CEP55 CDKN3 MAD2L1 ITGAL CD93 STARD13 RHOJ STON1 SH3GL2 ARHGAP6 RHOV CENPA HIST1H2AE PTH1R ADRB2 CDCA8 KIAA0101 HJURP NEK2 E2F8 DLGAP5 ARHGAP6 RHOJ CENPA NCAPG CD36 APOA1 RRM2 CDC6 E2F8 TOP2A ADCY4 PTGDR SLIT2 ROBO3 SPP1 PDGFB NUSAP1 DEPDC1 KIF26A KIF20A PPBP SERPING1 NUSAP1 CDCA3 SHC3 NTRK3 SFN CCNB2 SPP1 GOLM1 LYPD6B LYPD1 CXCL12 ADRB2 AOC3 ALDH3B2 ACTN2 VWF CALCRL ADRB2 A2M PPBP NOS1 RYR2 GAD1 STX1A NEK2 AURKB SPP1 CP CX3CR1 PPBP BUB1B CDC6 MYH3 TMOD1 COL4A6 COL11A1 FBLN5 FBLN1 KIF20A NUF2 ADCY4 ADRB2 ARHGEF15 RHOV BUB1B NCAPG VIP RAMP2 AURKB TROAP RAD51 PLK1 CDCA3 AURKB CX3CR1 S1PR1 MUC5B GCNT3 TCAP TMOD1 ECT2 RHOV RXFP1 CALCRL CALCRL ADCY4 AVPR2 PTGIR DES TNNC1 ITGA8 ITGA11 CDCA8 TROAP KRT6A KRT27 COL11A1 COL21A1 SKA3 PLK1 MAOB ALDH3B2 KRT80 KRT27 FUT2 B3GNT3 CXCL12 S1PR5 EDNRB ADRA1B ITGA8 ITGA10 UHRF1 HIST1H2BD KIF2C NCAPG RHOJ DLC1 UBE2C HECW2 HJURP TOP2A CCL16 CX3CR1 DSP TGM1 CDC25C AURKB NUSAP1 HMMR NEK2 RRM2 DLC1 RHOV CDCA3 BUB1B CYP3A7 CYP26B1 EPAS1 SALL4 EDN2 PTGFR KIF26A KIF4A B3GNT6 MUC5B GTSE1 CDC20 ESCO2 MAD2L1 CLDN14 CLDN11 P2RX6 P2RX1 UHRF1 TOP2A ECT2 RHOJ MUC5B GALNT16 HJURP UBE2C GPIHBP1 LYPD6B UHRF1 CDC20 APLN NPW MAOB INMT CYP1A2 CYP26B1 SPARCL1 CYR61 FGF10 FGF2 MUC5B ST6GALNAC3 VIP RAMP3 RXFP1 PTGIR DEPDC1 CEP55 GRIA1 TSPAN7 GATA1 GATA2 ACTN2 TMOD1 ADRA1D EDNRB MMP1 KLKB1 MUC5B B3GNT3 PDGFB PPBP DEPDC1 KIF20A KRT4 KRT27 FGF2 KLB ADRA1A EDNRB CDC20 ESCO2 VIPR1 ADCY4 COL4A3 COL11A1 TPX2 MAD2L1 AVPR2 ADCY4 PBK CDKN3 CDKN3 DLGAP5 APOA1 RBP2 CAMP CFP CDCA3 KIF4A CDC20 CDC25C CEP55 NEK2 HIST1H4E HIST1H2AC HJURP AURKB MMRN1 PPBP HIST1H2BD CCNB1 ADRB2 PTGIR ADRB2 PTGDR F10 PROC ITGAL P2RX1 NFASC GLDN CDKN3 MELK UBE2C ZBTB16 PDGFB S1PR1 CDKN3 CCNB2 VIP ADCY4 HJURP FOXM1 CLDN5 CLDN11 COL4A6 COL10A1 NUSAP1 FOXM1 CPEB1 PLK1 COL13A1 COL4A6 HIST1H2AC HIST1H4H LSAMP NTNG1 TOP2A NUF2 COL11A1 TLL1 CFD PDGFB NUSAP1 ECT2 LGI3 STX1B AVPR2 PTH1R PTGIR RAMP3 ADRA1D PTGFR COL4A3 COL21A1 SPARCL1 CHRDL1 TMOD1 TNNC1 TOP2A HMMR HIST1H2AC CCNB1 CDCA3 TTK PKP3 TGM1 MUC5B GALNT4 HK3 SORD TOP2A ECT2 CDH5 CDH3 HJURP KIF2C MCM10 GINS1 RXFP1 RAMP3 HKDC1 SORD C7 VTN UHRF1 CDCA7 CYP3A7 ALDH1A2 SYN2 LIN7A HJURP HIST1H2AC CLDN2 CLDN11 MUC5B GALNT13 HJURP CCNB2 GALNT4 MUC20 ARAP3 RHOV ADAMTSL3 THSD1 ADRA1D CHRM1 KRT4 KRT6A WNT7A SFRP1 GPR17 CXCL12 ADM2 VIPR1 MUC20 GALNT16 RGS11 RGS9BP COL4A3 PDGFB MUC20 GALNT13 RXFP1 AVPR2 COL4A3 COL4A6 ADM2 PTH1R SPP1 ITGA8 LIN7A STX1A ADRA1B CHRM1 SLIT3 ROBO4 AVPR2 ADRB2 ADRA1B GNRH1 COL4A3 COL10A1 CEP55 ANLN HJURP HIST1H2BD CXCL12 ADRA1B AURKB CDC6 MCEMP1 CD93 STON1 SH3GL3 GPR17 S1PR1 GOLM1 CP RYR2 CASQ2 CD36 CD93 COL11A1 COL17A1 MUC20 ST6GALNAC3 MMP7 MMP11 SH3GL2 ADRB2 COL17A1 COL21A1 CFD VWF HJURP CDC20 CLDN5 CDH5 WASF3 KDR COL11A1 COL6A6 CDC20 GINS2 LGI3 STX1A DES TNNT3 MMP12 A2M NCAPG CDC6 KIF4A CEP55 ADAMTS15 ADAMTSL3 CDC20 HECW2 CEP55 CCNB2 RHOJ ARAP3 EDNRB PTGFR VIP AVPR2 GAD1 CDO1 ADRA1A PTGFR COL4A3 COL17A1 GPC3 HPSE2 MUC20 GALNT7 MELK NUF2 SKA3 CCNB1 HIST1H2AC PLK1 COL13A1 COL11A1 HJURP TROAP ATP1B1 ATP1B2 CHRM1 ADRB2 CDC20 ZBTB16 PTGFR NMUR1 ADRA1D GNRH1 COL10A1 COL21A1 KIF14 DLGAP5 MMP1 MMP11 RXFP1 VIP CD93 P2RX1 CFD A2M UHRF1 HIST1H2AC PBK NEK2 KIF26B KIF4A FXYD1 ATP1B2 CHRM1 GNRH1 PTH1R ADCY4 DEPDC1 TTK MMRN1 A2M CLEC3B TIMP3 APLN CXCL12 NPW NMUR1 COL13A1 COL10A1 COL4A6 COL21A1 COL13A1 COL4A3 ECT2 NCAPG RS1 ATP1B2 HJURP TTK FXYD6 ATP1B1 ITGAL MCEMP1 MUC5B GALNT7 KCNMB3 PRKG2 ADRA1A GNRH1 KIF4A ANLN ADRA1A CHRM1 KIF20A CENPA PTGDR RAMP3 DOCK4 PDGFB CLDN2 CLDN5 PTK6 HBEGF RSPO3 RSPO2 ADRA1D ADRA1B CEP55 NUF2 PDGFB FLT4 EDN2 NMUR1 RAB40A RAB25 EDN2 KISS1R CXCL12 NMUR1 COL13A1 COL21A1 BIRC5 KIAA0101 STX1A STX1B KIF26A KIF2C KIF2C MELK DOCK4 RPL22L1 RXFP1 PTGDR CALCRL VIPR1 RSPO1 RSPO4 HJURP BUB1B F10 GP9 PPBP CFP FOXM1 BIRC5 A2M MMP7 CYR61 GPC3 GPBAR1 ADRB2 EXO1 CDC6 KIAA0101 CCNB1 RSPO1 RSPO2 GPBAR1 VIPR1 PTK6 SRMS PTK6 EPAS1 COL6A6 COL10A1 ACTN2 GRIA1 CFD PPBP ARHGAP20 RHOV ADAMTSL4 CFP RAPGEF4 RYR2 ADAMTSL4 ADAMTSL3 GAD1 ALDH3B2 RHOJ DEPDC1B ADM2 ADRB2 ADAMTSL4 ADAMTS15 STARD8 RHOJ MCM10 EXO1 ADRA1B ADRB2 ECT2 CCNB2 PTGFR ADRA1B ADAMTS15 ADAMTS8 ADCY4 S1PR1 ADRB2 RAMP3 CDCA3 CCNB1 UBE2C KLHL41 FIGF PPBP ITGA8 ITGAL NMUR1 NPFF COL6A6 COL17A1 CD36 SLC2A5 ADCY4 PTGIR TOP2A CENPA COL13A1 COL17A1 CD36 P2RX1 HSPB3 HSPB2 GPR17 ADRA1B RSPO3 RSPO4 GATA1 HIST1H2BD DES TMOD1 S1PR1 CX3CL1 CD36 ITGAL GPR17 CHRM1 KIF26A KIF26B RXFP1 ADCY4 TPX2 ANLN CALCRL PTH1R CDC20 CDKN3 RSPO3 RSPO1 KRT80 KRT6A COL4A6 COL17A1 WNT7A WNT3A KRT4 KRT80 KIF20A TROAP HPDL HGD GP9 PROC COL4A6 COL6A6 RHOJ ARHGAP20 MMRN1 SERPING1 GP9 KLKB1 HJURP MELK CDC25A CDC6 KIF26B KIF2C ECT2 AURKB GPIHBP1 MDGA1 CLDN5 CLDN14 MASP2 FCN3 SLIT2 SLIT3 PTPRB CD93 CEP55 AURKB ADM2 VIP CAMP TCN1 RXFP1 ADRB2 ITGAL PTPRB PBK CDCA2 GPC3 CHRDL1 S1PR5 NMUR1 PTGDR PTGIR EDNRB F2RL1 RRM2 PLK1 ADAMTSL4 THSD1 CENPA TPX2 RHOJ RHOV XDH CYP1A2 RAD51 HIST1H2BD HJURP BIRC5 CALCRL AVPR2 ADAMTSL4 SBSPON AVPR2 VIPR1 GPBAR1 VIP ADCY4 RAMP3 CDKN3 NCAPG ENTPD8 RRM2 RSPO2 RSPO4 CXCL12 ADCY4 CLDN2 CLDN14 GPBAR1 AVPR2 ADRB2 RAMP2 GPC3 WNT3A NRN1 MDGA1 A2M RHOJ PTGFR GNRH1 NRN1 LSAMP S1PR5 S1PR1 HJURP CDCA8 CYP1A2 ALDH1A2 APLN CX3CL1 NRN1 GPIHBP1 AMBP APOA1 WNT2B WNT3A GPR17 ADCY4 ITGA10 ITGA11 CD36 MCEMP1 MMRN1 CFD PITX1 TBX4 MYH3 DES FCN1 FCN3 A2M FIGF LSAMP LYPD1 LYPD6B NTNG1 HJURP HIST1H4H GPC3 PROC TNNT3 TNNT2 GPR17 ADRA1D ADAMTSL3 CFP ADAMTSL4 ADAMTS8 ACTN2 TNS1 EDNRB CHRM1 GFRA2 DOK6 SPP1 PROC GPR17 APLN GFRA2 SHC3 ADM2 PTGDR ADCY4 RAMP2 MMRN1 FIGF TTK UBE2C HIST1H4E HJURP ACTN2 A2M S1PR5 CX3CL1 GPR17 EDNRB PPBP TCN1 GPR17 F2RL1 PBK ANLN COL6A6 COL21A1 RXFP1 PTH1R HIST1H2BD FOSB CALCRL PTGIR CHRM1 F2RL1 EDNRB NPFF LSAMP MDGA1 GPSM1 APLN VIPR1 PTH1R APLN NMUR1 GPBAR1 ADCY4 ADCY4 NMUR1 STARD8 RHOV RECK NTNG1 AVPR2 RAMP2 CHRM1 NMUR1 GPR17 CX3CL1 WIF1 WNT7A SPSB4 KLHL41 CDC20 SPSB4 CACNA2D2 STX1A PTGFR F2RL1 MAD2L1 GINS2 EDN2 NPFF TTK KIAA0101 WNT2B WNT7A ADAMTSL3 ADAMTS8 GPR17 NMUR1 CDCA2 NUF2 APLN S1PR1 ZBTB16 HECW2 PBK AURKB SEMA5A CFP DSG2 TGM1 RNF182 UBE2C ADCY4 PRKCE SPARCL1 APOA1 NMUR1 KISS1R SLC2A5 P2RX1 ACTN2 MMRN1 PECAM1 VWF SPARCL1 CP TEK FGF2 MFAP4 SFTPD SBSPON ADAMTSL3 GPC3 CP RGS11 RGS9 CDCA3 MAD2L1 ADRA1A NMUR1 GPBAR1 PTGDR CHRM1 KISS1R ITGAL ITGA11 NRN1 NTNG1 GPR17 S1PR5 NMUR1 GNRH1 RNF182 ZBTB16 ADH1B BCO1 CHRM1 NPFF CYR61 GOLM1 SH3GL3 ADRB2 CEP55 BIRC5 GOLM1 APOA1 CD36 PTPRB ITGA10 ITGAL GPIHBP1 LSAMP CDC20 FAM64A ECT2 CDCA8 WNT2B SFRP1 A2M MMP11 LCN2 CFP ACTN2 SERPING1 GPR17 CX3CR1 GPR17 KISS1R CCL16 S1PR1 NRN1 LYPD1 ADAMTS15 THSD1 VIPR1 ADRB2 LYPD1 NTNG1 EDNRB NMUR1 A2M RHOV AVPR2 PTGDR SLC2A5 ITGAL RNF182 CDC20 CX3CR1 PCP2 CDCA3 TPX2 SLC2A5 CD93 VIPR1 PTGDR COL4A3 COL6A6 TPD52 SH3GL2 SYNE1 HIST1H2BD GPR17 GPSM1 COL17A1 COL10A1 GPIHBP1 NTNG1 THSD1 CFP RXFP1 ADM2 KRT17 KRT27 CDH5 PTPRB COL6A6 PDGFB F2RL1 GNRH1 ADRA1D KISS1R UBE2C SPSB4 IL7R ADRB2 GPIHBP1 ART4 DEPDC1 NEK2 KIF4A TTK AVPR2 IL7R UBE2C NCAPG RXFP1 VIPR1 CX3CR1 NMUR1 PRRT2 ADRA1B UHRF1 AURKB CDC20 KLHL41 ECT2 CKAP2L SPARCL1 GOLM1 PRELP B3GNT3 CYR61 APOA1 PTGFR CHRM1 VIPR1 PTGIR SBSPON CFP ADRA1D NMUR1 LSAMP LYPD6B NPW ADCY4 ZBTB16 SPSB4 PTGIR RAMP2 ZBTB16 KLHL41 PTPRB P2RX1 CHRDL1 CP HIST1H2AC SYNE1 HIST1H2AC FOSB SERPINA4 TIMP3 SLC2A5 PTPRB SLIT2 HOXA2 TPSAB1 MMP1 SH3GL2 AVPR2 CDCA3 RRM2 B3GNT3 OGN HIST1H2AC GATA1 RNF182 HECW2 ACTN2 PPBP ADM2 ADCY4 TCN1 CFP GPIHBP1 LYPD1 CFD FIGF AVPR2 SH3GL3 NPR1 PDE5A GPSM1 NPW ADRA1B NPFF HOXA4 HIST1H2BD CCL16 APLN HIST1H2BD MND1 CXCL12 PCP2 RXFP1 RAMP2 NPW PCP2 NPW S1PR5 CENPA MELK PCP2 NMUR1 PTH1R PTGIR SEMA5A SBSPON CXCL12 NPW GPBAR1 ADM2 LYPD6B RECK OR52N4 REEP6 SPP1 CHRDL1 EXO1 RRM2 S1PR5 PPBP NTNG1 ART4 SPSB4 HECW2 CEP55 KIF14 ADAMTS15 CFP PTH1R PTGDR PCP2 CX3CL1 CDCA8 NCAPH GPBAR1 RAMP2 RNF182 SPSB4 ADRA1B F2RL1 NRN1 ART4 NMUR1 S1PR1 GPR17 PTGFR CX3CR1 NPW SPARCL1 PROC PRRT2 S1PR1 GPSM1 CX3CR1 CNKSR2 VWF PRRT2 FLT4 HIST1H2BD ITGA2B ADRA1D F2RL1 GPSM1 CXCL12 PRRT2 FIGF CYR61 CP ADRA1B KISS1R HIST1H2BD HOXA2 CHRDL1 PROC CCL16 GPSM1 NMUR1 PPBP ADCY4 CX3CL1 CALCRL PTGDR NRN1 LYPD6B MDGA1 LYPD6B STON1 ADRB2 NPW CX3CL1 DEPDC1B RHOV SERPINA4 CLEC3B EYA4 HIST1H2BD GPSM1 S1PR1 EDN2 F2RL1 GPBAR1 PTGIR SH3GL2 KIF4A PTGFR KISS1R RNF182 KLHL41 MDGA1 RECK CCL16 ADCY4 SBSPON THSD1 ACTN2 CFD CYR61 PROC SEMA5A ADAMTS8 SLC2A5 MCEMP1 NPW PPBP APLN S1PR5 SEMA5A ADAMTS15 PCP2 PPBP SEMA5A ADAMTSL4 HIST1H2AC MEIS1 SCN7A NFASC GPR17 NPFF SBSPON ADAMTS8 GPSM1 PPBP S1PR1 PPBP ACTN2 FIGF ADM2 PTGIR HIST1H2AC HOXA4 ADRA1B NMUR1 GRIA1 TGFA LYPD1 RECK CYR61 CHRDL1 ADCY4 PPBP ADRA1A KISS1R CNKSR2 ITGA2B BUB1B NCAPH F2RL1 KISS1R CCL16 NMUR1 GPSM1 NMUR1 HIST1H2AC HOXA2 ADRA1A NPFF PCP2 S1PR1 GPR17 NPW CCL16 NPW VIP PTGDR PDGFB SERPING1 SH3GL3 IL7R APLN ADCY4 LAMC3 CHRM1 ADRA1D NPFF EDNRB KISS1R CXCL12 CHRM1 CCL16 S1PR5 GOLM1 PROC S1PR5 ADCY4 LSAMP RECK PTPRB MCEMP1 RECK ART4 GPSM1 S1PR5 HIST1H2AC ITGA2B LYPD6B ART4 MDGA1 ART4 STON1 IL7R GPR17 GNRH1 GPBAR1 RXFP1 GPSM1 CX3CL1 MMRN1 PDGFB CCL16 GPR17 ADRA1A F2RL1 F2RL1 NPFF SEMA5A ADAMTSL3 FIGF SERPING1 PTGFR NPFF COL13A1 COL6A6 GPR17 EDN2 CHRDL1 APOA1 GPIHBP1 RECK LSAMP ART4 ADAMTS15 SBSPON THSD1 ADAMTS8 CX3CR1 ADCY4 GPBAR1 CALCRL GOLM1 CHRDL1 PTGDR RAMP2 SH3GL2 IL7R AVPR2 RAMP3 KLHL41 HECW2 MDGA1 LYPD1 ADAMTS8 CFP GPR17 PPBP ACTN2 PDGFB GPBAR1 RAMP3 GPR17 PCP2 STON1 AVPR2 NMUR1 CX3CL1 NMUR1 F2RL1 NRN1 RECK GPR17 ADRA1A S1PR5 PCP2 APLN CX3CR1 ADM2 AVPR2 APLN PCP2 APLN PPBP EDN2 CHRM1 LYPD1 ART4 NPW S1PR1 HIST1H2BD MEIS1 SEMA5A THSD1 GPBAR1 PTH1R CCL16 PCP2 GAD1 MS4A2
代码
# 设置工作目录 setwd("") # 设置工作目录 # 读取输入文件 rt <- read.table("input.txt", header = T, sep = "\t", comment.char = "", check.names = FALSE) tb <- table(c(as.vector(rt[,1]), as.vector(rt[,2]))) # 对两列的频率进行统计 # tb <- table(as.vector(rt[,1])) # 只对第一列的频率进行统计 tb <- sort(tb, decreasing = T) # 频率高的排前面
# 输入每个基因的邻接点节点数目 outTab <- as.data.frame(tb) # 将上述频率转变成数据框 colnames(outTab) = c("Gene", "Count") # 修改数据框的列名 write.table(outTab, file = "statResult.xls", sep="\t", quote = F, row.names = F) # 保存为xls表格
"statResult.xls":
# 定义柱状图显示基因数目 showNum <- 30 # 先设置为显示30个基因数目 if(nrow(tb) < showNum){ showNum = nrow(outTab) } # 根据实际得到的的基因数目进行调整 n <- as.matrix(tb)[1:showNum,] # 取顺序靠前的相应数目的基因
# 绘制柱状图 pdf(file = "barplot.pdf", width = 7, height = 6) # 创建一个空白pdf par(mar = c(5,7,2,3), xpd = TRUE) # mar用于设置图形的边距(下左上右)。xpd用于设置图形打印裁剪方式,TRUE表示裁剪到图形区域 bar <- barplot(n, horiz = TRUE, col = "skyblue", names = FALSE, # horiz=TRUE表示创建“水平”条形图,第一个条形在底部。col设置颜色。name=FALSE表示不显示纵坐标名称 xlim = c(0,ceiling(max(n)/5)*5), # x轴范围。用n的最大值向上以5为倍数取整 xlab = "Number of adjacent nodes") # x轴标签 text(x = n*0.95, y = bar, n) # 在条形图末端加数字 text(x = -0.2, y = bar, label = names(n), xpd = T, pos = 2) # 在纵坐标处加基因名称 # dev.off() # 关闭并将图形保存至pdf